Tuesday, October 16, 2012

Fishless Cycle



Currently, we are in the process of cycling our main aquarium. When fish live in the aquarium, they produce ammonia in their wastes and it accumulates and is toxic to the fish. Natural bacterial cultures, known as biological filters, will convert the ammonia to nitrates and nitrites. However, bacteria only grows to its capacity; therefore, if there is no ammonia to convert, the bacteria cultures won't grow. In order to establish the necessary bacteria colonies, ammonia is added and readings for ammonia, nitrates, and nitrites are taken twice daily until a spike is seen first in the ammonia levels and then nitrates and nitrites. In my case I added ammonium phosphate (the phosphate is no danger to the zebrafish). Below you can see the spike in ammonia, while to nitrate and nitrate levels still remain at zero.



Once the biological filters, the bacteria colonies, are established, we need to make the water slightly acidic to a pH or 6.6 to 6.8. We also need to greatly soften the water by adding salts. Once, the pH and water hardness are regulated, it's time to get our fish!

Friday, October 12, 2012

Honors Project Proposal – Alabama Water Quality

Introduction
With the ever increasing range and use of pharmaceuticals, anti-biotics, and birth control among the American population the levels of these chemicals are likewise increasing in the water supply. The intentional and unintentional disposal of these chemicals all leads to their place in the sewer system. According to a national survey done by the Associated Press, many water distributing companies across the U.S. don’t even test for these chemicals, and they are being found in our drinking water (1). The effect of these chemicals in the water supply is somewhat researched, but widely unknown in most cases (2, 3). This makes necessary more research on the effects of chemicals in the water supply not only on fish, but also on other organisms such as bacteria, fruit flies, and even humans.
There are two mains sources of pharmaceuticals in our water supply. One is their consumption by humans for medical reasons. After the body processes these chemicals they are excreted and end up in the sewer system. Another major source is from the agricultural industry and animal farming. Several anti-biotics and hormones are used in agriculture and animal farming, and these chemicals also end up in the sewer system (4).
The USGS stated before congress that the presence of the aforementioned chemicals in the water supply is a cause for concern and recommends more research in this area (5). In a different study, the USGS expressed a concern for interactions between pharmaceuticals in the public water supply (6). They found evidence to suggest that the interactions between these chemicals are capable of disrupting the endocrine system in organisms such as fish (6). Even though the physiological effects of these chemicals are widely unknown, there is research that suggests that low doses of drugs such as anti-biotics, hormones, and waste products such as bisphenol-A can cause serious effects over an extended period of time.

Goal 1: Water Collection
            First, we would need to collect water samples from various cities around the state of Alabama. We will collect water samples from before and after the city’s water treatment plant in order to see which chemicals they are effectively filtering out and what remains in the public water supply. Samples will be taken from cities such as: Marion, Birmingham, Tuscaloosa, Mobile, and Montgomery. In addition, we will also take samples from the natural waterways including: the Cahaba River, Alabama River, Lake Tuscaloosa, etc. Taking samples at the major run-off points and then approximately one mile downstream will help us measure how effectively the chemicals used in agricultural farming are diluted through natural cleaning mechanisms.

Goal 2: Identification of pharmaceuticals present
            The next step in our research is to identify which chemicals are present. To do this will analyze the water samples using mass spectrometry. This method will be accurate and sensitive to the chemicals we are looking for (anti-biotics, sex hormones, industrial chemicals, etc.), even at low concentrations.

Goal 3: Toxicological effects in model organisms
            Once we know which chemicals are present in the public water supply and the natural waterways, we will conduct various experiments with model organisms to determine their toxicological effects. In order to determine the effects of these chemicals on the environment, we will conduct a series of dosage experiments on zebrafish (D. rerio), bacteria (E. coli), and fruit flies (D. melanogaster), three species that are often used as models to study the effects of chemicals on living things. We are interested to see how these chemicals affect these organisms both at high doses over short periods of time and at low doses over long periods of time.

   
zebrafish (D. rerio)

 
bacteria (E. coli)

 
fruit flies (D. melanogaster)


References
(1)    Goodman, A. (2008) Sedatives and Sex Hormones in Our Water Supply. Associated Press. http://www.alternet.org/water/80505/?page=1
(2)    Schreck, C. (2007) Endocrine Disruption: Sex-Changing Fish and More. Unitied States Geological Survey. http://gallery.usgs.gov/audios/3
(3)    Collier, R. (2012) Swallowing the pharmaceutical waters. Canadian Medical Association Journal. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3273502/?tool=pmcentrez
(4)    Bartekt-Hunt, S., Snow, D.D., Damon-Powell, T., Miesbach, D. (2011) Occurrence of steroid hormones and antibiotics in shallow groundwater impacted by livestock waste control facilities. Journal Contaminant Hydrology
(5)    Hirsch, R.M. (2008) Congressional statement made by the Associate Director for Water (Dr. Robert M. Hirsch) at the USGS before the Committee on Environment and Public Works.
(6)    Barber, L.B., Murphy, S.F., Verplanck, P.L., Sandstrom, M.W., Taylor, H.E., and Furlong, E.T. (2006) Chemical loading into surface water along a hydrological, biogeochemical, and land use gradient—A holistic watershed approach. Environmental Science and Technology, v. 40, no. 2, p. 475-486.